MLOC_56904 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains0.3511011.16080.8712760.809146
LEAShoots from the seedlings (10 cm shoot stage)0.9494830.7737371.07630.791881
INF1Young developing inflorescences (5mm)1.878681.768671.870091.41586
INF2Developing inflorescences (1-1.5 cm)2.013592.269561.825142.1457
ROORoots from the seedlings (10 cm shoot stage)1.536492.201571.385082.38178
NODDeveloping tillers at six leaf stage, 3rd internode1.97222.543715.316499.92848
CAR5Developing grain, bracts removed (5 DPA)0.9387011.001821.1680.933875
CAR15Developing grain, bracts removed (15 DPA)0.3411410.2213880.1736480.557887



CDS Structure of MLOC_56904






Members of Gene Cluster

This cluster has a confidence assignment of High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_56904.1
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
MLOC_56904.1CUST_13598_PI427708080AvailableAvailablecontig_41236 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os01g05600.1 -1 0.0 1339 712/990 (72%) 13101.m00540 protein NBS-LRR disease resistance protein, putative
TAIR PP10 AT3G14470.1 -1 2e-67 249 234/867 (27%) NB-ARC domain-containing disease resistance protein | chr3:4857940-4861104 FORWARD LENGTH=1054