- Predicted Gene MLOC_56904
MLOC_56904 FPKM values
FPKM by Treatment | FPKM by Replicate |
|
|
Treatment ID | Treatment Description | Rep 1 FPKM | Rep 2 FPKM | Rep 3 FPKM | Treatment FPKM |
---|
EMB | 4-day embryos dissected from germinating grains | 0.351101 | 1.1608 | 0.871276 | 0.809146 |
LEA | Shoots from the seedlings (10 cm shoot stage) | 0.949483 | 0.773737 | 1.0763 | 0.791881 |
INF1 | Young developing inflorescences (5mm) | 1.87868 | 1.76867 | 1.87009 | 1.41586 |
INF2 | Developing inflorescences (1-1.5 cm) | 2.01359 | 2.26956 | 1.82514 | 2.1457 |
ROO | Roots from the seedlings (10 cm shoot stage) | 1.53649 | 2.20157 | 1.38508 | 2.38178 |
NOD | Developing tillers at six leaf stage, 3rd internode | 1.9722 | 2.54371 | 5.31649 | 9.92848 |
CAR5 | Developing grain, bracts removed (5 DPA) | 0.938701 | 1.00182 | 1.168 | 0.933875 |
CAR15 | Developing grain, bracts removed (15 DPA) | 0.341141 | 0.221388 | 0.173648 | 0.557887 |
CDS Structure of MLOC_56904
Members of Gene Cluster
This cluster has a confidence assignment of
High Confidence.
The gene has a transcript that is part of a cluster represented by
MLOC_56904.1
Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)
Database | Hit | Frame | E-value | Score | % Identity | Description |
---|
Rice PP6 |
LOC_Os01g05600.1 |
-1 |
0.0 |
1339 |
712/990 (72%) |
13101.m00540 protein NBS-LRR disease resistance protein, putative |
TAIR PP10 |
AT3G14470.1 |
-1 |
2e-67 |
249 |
234/867 (27%) |
NB-ARC domain-containing disease resistance protein | chr3:4857940-4861104 FORWARD LENGTH=1054 |