- Predicted Gene MLOC_56893
MLOC_56893 FPKM values
FPKM by Treatment | FPKM by Replicate |
|
|
Treatment ID | Treatment Description | Rep 1 FPKM | Rep 2 FPKM | Rep 3 FPKM | Treatment FPKM |
---|
EMB | 4-day embryos dissected from germinating grains | 8.04324 | 16.379 | 14.4105 | 12.7437 |
LEA | Shoots from the seedlings (10 cm shoot stage) | 16.2878 | 11.5786 | 10.8072 | 10.931 |
INF1 | Young developing inflorescences (5mm) | 9.60455 | 10.0614 | 11.308 | 7.48834 |
INF2 | Developing inflorescences (1-1.5 cm) | 10.8414 | 10.4781 | 11.1379 | 11.1698 |
ROO | Roots from the seedlings (10 cm shoot stage) | 5.14998 | 8.89778 | 8.24531 | 9.83188 |
NOD | Developing tillers at six leaf stage, 3rd internode | 16.4831 | 17.5205 | 15.8456 | 57.397 |
CAR5 | Developing grain, bracts removed (5 DPA) | 8.56391 | 7.9742 | 9.65586 | 8.04676 |
CAR15 | Developing grain, bracts removed (15 DPA) | 4.71355 | 4.33051 | 4.62842 | 9.2063 |
CDS Structure of MLOC_56893
Members of Gene Cluster
This cluster has a confidence assignment of
High Confidence.
The gene has a transcript that is part of a cluster represented by
MLOC_56893.7
Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)
Database | Hit | Frame | E-value | Score | % Identity | Description |
---|
Rice PP6 |
LOC_Os05g46030.1 |
-3 |
0.0 |
1101 |
613/1148 (53%) |
13105.m04899 protein myosin head family protein, expressed |
TAIR PP10 |
AT1G54560.1 |
-3 |
2e-148 |
492 |
303/691 (44%) |
| Symbols: XIE, ATXIE | Myosin family protein with Dil domain | chr1:20371649-20379745 REVERSE LENGTH=1529 |