MLOC_56891 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains13.54959.8382612.664610.7277
LEAShoots from the seedlings (10 cm shoot stage)5.357778.3281610.99125.95031
INF1Young developing inflorescences (5mm)3.006315.553544.507173.61965
INF2Developing inflorescences (1-1.5 cm)4.0062612.49035.522088.07572
ROORoots from the seedlings (10 cm shoot stage)40.703731.364839.595732.4965
NODDeveloping tillers at six leaf stage, 3rd internode2.9163919.364320.58549.2475
CAR5Developing grain, bracts removed (5 DPA)6.427324.396764.160914.48304
CAR15Developing grain, bracts removed (15 DPA)2.596633.565413.956047.81452



CDS Structure of MLOC_56891






Members of Gene Cluster

This cluster has a confidence assignment of High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_56891.2
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
AK372144NoneNoneNoneNone
MLOC_56891.2CUST_3676_PI427708080AvailableAvailablecontig_41219 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os01g65100.1 +2 0.0 803 447/509 (88%) 13101.m07030 protein peptide transporter, putative, expressed
TAIR PP10 AT1G22540.1 +2 7e-180 537 295/517 (57%) Major facilitator superfamily protein | chr1:7964202-7966222 FORWARD LENGTH=557