- Predicted Gene MLOC_56859
MLOC_56859 FPKM values
FPKM by Treatment | FPKM by Replicate |
![](/morexGenes/blast_net_images/MLOC_56859_assembly3_WGSMorex_rbca.fasta_treatments.fpkms.png)
| ![](/morexGenes/blast_net_images/MLOC_56859_assembly3_WGSMorex_rbca.fasta_replicates.fpkms.png)
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Treatment ID | Treatment Description | Rep 1 FPKM | Rep 2 FPKM | Rep 3 FPKM | Treatment FPKM |
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EMB | 4-day embryos dissected from germinating grains | 0.0444523 | 0.0379731 | 0 | 0.0467956 |
LEA | Shoots from the seedlings (10 cm shoot stage) | 0 | 0 | 0.269099 | 0.120298 |
INF1 | Young developing inflorescences (5mm) | 0.0996224 | 0 | 0 | 0.0590758 |
INF2 | Developing inflorescences (1-1.5 cm) | 0.0917453 | 0.0906808 | 0.0398797 | 0.0839254 |
ROO | Roots from the seedlings (10 cm shoot stage) | 0.0783551 | 0.047082 | 0 | 0.0874107 |
NOD | Developing tillers at six leaf stage, 3rd internode | 0 | 0.0281194 | 0.0113517 | 0.0679816 |
CAR5 | Developing grain, bracts removed (5 DPA) | 0.242116 | 0.113556 | 0.166315 | 0.156519 |
CAR15 | Developing grain, bracts removed (15 DPA) | 0.0699688 | 0 | 0.0507777 | 0.141511 |
CDS Structure of MLOC_56859
Members of Gene Cluster
This cluster has a confidence assignment of
non-High Confidence.
The gene has a transcript that is part of a cluster represented by
MLOC_56859.1
Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)
Database | Hit | Frame | E-value | Score | % Identity | Description |
---|
Rice PP6 |
LOC_Os10g13960.1 |
-1 |
3e-18 |
90 |
45/86 (52%) |
13110.m01229 protein retrotransposon protein, putative, unclassified |
TAIR PP10 | None | - | - | - | - | - |