MLOC_56859 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains0.04445230.037973100.0467956
LEAShoots from the seedlings (10 cm shoot stage)000.2690990.120298
INF1Young developing inflorescences (5mm)0.0996224000.0590758
INF2Developing inflorescences (1-1.5 cm)0.09174530.09068080.03987970.0839254
ROORoots from the seedlings (10 cm shoot stage)0.07835510.04708200.0874107
NODDeveloping tillers at six leaf stage, 3rd internode00.02811940.01135170.0679816
CAR5Developing grain, bracts removed (5 DPA)0.2421160.1135560.1663150.156519
CAR15Developing grain, bracts removed (15 DPA)0.069968800.05077770.141511



CDS Structure of MLOC_56859






Members of Gene Cluster

This cluster has a confidence assignment of non-High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_56859.1
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
MLOC_56859.1CUST_12798_PI427708083AvailableAvailablecontig_41197 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os10g13960.1 -1 3e-18 90 45/86 (52%) 13110.m01229 protein retrotransposon protein, putative, unclassified
TAIR PP10None-----