- Predicted Gene MLOC_56858
MLOC_56858 FPKM values
| FPKM by Treatment | FPKM by Replicate |

| 
|
| Treatment ID | Treatment Description | Rep 1 FPKM | Rep 2 FPKM | Rep 3 FPKM | Treatment FPKM |
|---|
| EMB | 4-day embryos dissected from germinating grains | 1.48333 | 3.91976 | 3.45665 | 2.67918 |
| LEA | Shoots from the seedlings (10 cm shoot stage) | 3.35119 | 2.02571 | 2.18772 | 1.96016 |
| INF1 | Young developing inflorescences (5mm) | 3.37717 | 2.90646 | 3.47303 | 2.40746 |
| INF2 | Developing inflorescences (1-1.5 cm) | 4.30453 | 4.33534 | 3.99059 | 4.15442 |
| ROO | Roots from the seedlings (10 cm shoot stage) | 1.84143 | 2.73465 | 1.31373 | 2.43944 |
| NOD | Developing tillers at six leaf stage, 3rd internode | 1.95598 | 2.98183 | 1.38526 | 7.37751 |
| CAR5 | Developing grain, bracts removed (5 DPA) | 5.83503 | 5.40913 | 6.30214 | 4.75908 |
| CAR15 | Developing grain, bracts removed (15 DPA) | 4.03024 | 3.16157 | 4.14234 | 7.92961 |
CDS Structure of MLOC_56858
Members of Gene Cluster
This cluster has a confidence assignment of
non-High Confidence.
The gene has a transcript that is part of a cluster represented by
MLOC_56858.2
Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)
| Database | Hit | Frame | E-value | Score | % Identity | Description |
|---|
| Rice PP6 |
LOC_Os11g24560.1 |
-2 |
1e-16 |
86 |
44/48 (92%) |
13111.m02341 protein protein transport protein, putative, expressed |
| TAIR PP10 |
AT1G05520.1 |
-2 |
7e-16 |
83 |
42/56 (75%) |
Sec23/Sec24 protein transport family protein | chr1:1631126-1635703 REVERSE LENGTH=783 |