- Predicted Gene MLOC_56807
MLOC_56807 FPKM values
FPKM by Treatment | FPKM by Replicate |
![](/morexGenes/blast_net_images/MLOC_56807_assembly3_WGSMorex_rbca.fasta_treatments.fpkms.png)
| ![](/morexGenes/blast_net_images/MLOC_56807_assembly3_WGSMorex_rbca.fasta_replicates.fpkms.png)
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Treatment ID | Treatment Description | Rep 1 FPKM | Rep 2 FPKM | Rep 3 FPKM | Treatment FPKM |
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EMB | 4-day embryos dissected from germinating grains | 3.08131 | 0.994358 | 2.75014 | 2.01756 |
LEA | Shoots from the seedlings (10 cm shoot stage) | 1.08675 | 0.736535 | 0 | 0.810877 |
INF1 | Young developing inflorescences (5mm) | 0.19629 | 0.197549 | 0.728073 | 0.339382 |
INF2 | Developing inflorescences (1-1.5 cm) | 0.52897 | 0.944613 | 0.685625 | 0.84906 |
ROO | Roots from the seedlings (10 cm shoot stage) | 0.410136 | 1.86517 | 0 | 2.77047 |
NOD | Developing tillers at six leaf stage, 3rd internode | 0.33556 | 2.14361 | 0.801012 | 6.15062 |
CAR5 | Developing grain, bracts removed (5 DPA) | 0 | 0.185503 | 0.219689 | 0.194235 |
CAR15 | Developing grain, bracts removed (15 DPA) | 0.401752 | 0 | 0.299726 | 0.861838 |
CDS Structure of MLOC_56807
Members of Gene Cluster
This cluster has a confidence assignment of
non-High Confidence.
The gene has a transcript that is part of a cluster represented by
MLOC_56807.1
Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)
Database | Hit | Frame | E-value | Score | % Identity | Description |
---|
Rice PP6 |
LOC_Os02g13140.1 |
+2 |
5e-65 |
208 |
94/111 (85%) |
13102.m01457 protein xaa-Pro dipeptidase, putative, expressed |
TAIR PP10 |
AT4G29490.1 |
+2 |
7e-59 |
191 |
84/111 (76%) |
Metallopeptidase M24 family protein | chr4:14487943-14491321 FORWARD LENGTH=486 |