MLOC_56807 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains3.081310.9943582.750142.01756
LEAShoots from the seedlings (10 cm shoot stage)1.086750.73653500.810877
INF1Young developing inflorescences (5mm)0.196290.1975490.7280730.339382
INF2Developing inflorescences (1-1.5 cm)0.528970.9446130.6856250.84906
ROORoots from the seedlings (10 cm shoot stage)0.4101361.8651702.77047
NODDeveloping tillers at six leaf stage, 3rd internode0.335562.143610.8010126.15062
CAR5Developing grain, bracts removed (5 DPA)00.1855030.2196890.194235
CAR15Developing grain, bracts removed (15 DPA)0.40175200.2997260.861838



CDS Structure of MLOC_56807






Members of Gene Cluster

This cluster has a confidence assignment of non-High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_56807.1
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
MLOC_56807.1CUST_7843_PI427708083AvailableAvailablecontig_41168 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os02g13140.1 +2 5e-65 208 94/111 (85%) 13102.m01457 protein xaa-Pro dipeptidase, putative, expressed
TAIR PP10 AT4G29490.1 +2 7e-59 191 84/111 (76%) Metallopeptidase M24 family protein | chr4:14487943-14491321 FORWARD LENGTH=486