MLOC_56805 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains16.859926.693724.676524.0352
LEAShoots from the seedlings (10 cm shoot stage)23.730219.617619.059617.6724
INF1Young developing inflorescences (5mm)36.864635.999737.328230.7665
INF2Developing inflorescences (1-1.5 cm)35.858838.476334.248839.7658
ROORoots from the seedlings (10 cm shoot stage)19.452426.720621.75829.8636
NODDeveloping tillers at six leaf stage, 3rd internode16.048520.93127.256367.9981
CAR5Developing grain, bracts removed (5 DPA)42.31336.891237.954937.4449
CAR15Developing grain, bracts removed (15 DPA)14.466314.843712.89333.0538



CDS Structure of MLOC_56805






Members of Gene Cluster

This cluster has a confidence assignment of High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_56805.1
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
MLOC_56805.1CUST_13586_PI427708080AvailableAvailablecontig_41166 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os09g08670.1 +2 0.0 752 533/827 (64%) 13109.m00730 protein protein of unknown function DUF1296 domain containing protein, expressed
TAIR PP10 AT3G07660.1 +2 1e-90 313 219/551 (40%) Kinase-related protein of unknown function (DUF1296) | chr3:2445275-2450372 REVERSE LENGTH=841