- Predicted Gene MLOC_56801
MLOC_56801 FPKM values
FPKM by Treatment | FPKM by Replicate |
![](/morexGenes/blast_net_images/MLOC_56801_assembly3_WGSMorex_rbca.fasta_treatments.fpkms.png)
| ![](/morexGenes/blast_net_images/MLOC_56801_assembly3_WGSMorex_rbca.fasta_replicates.fpkms.png)
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Treatment ID | Treatment Description | Rep 1 FPKM | Rep 2 FPKM | Rep 3 FPKM | Treatment FPKM |
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EMB | 4-day embryos dissected from germinating grains | 0.102589 | 0 | 0.102294 | 0.084138 |
LEA | Shoots from the seedlings (10 cm shoot stage) | 0.335601 | 0.170479 | 0.279975 | 0.232554 |
INF1 | Young developing inflorescences (5mm) | 0.575788 | 0.317135 | 0.68762 | 0.41023 |
INF2 | Developing inflorescences (1-1.5 cm) | 0.167022 | 0.247904 | 0.233289 | 0.241512 |
ROO | Roots from the seedlings (10 cm shoot stage) | 0 | 0 | 0 | 0 |
NOD | Developing tillers at six leaf stage, 3rd internode | 0.1522 | 0.159854 | 0.087231 | 0.507764 |
CAR5 | Developing grain, bracts removed (5 DPA) | 1.5491 | 2.2477 | 2.10989 | 1.93028 |
CAR15 | Developing grain, bracts removed (15 DPA) | 4.46957 | 3.5079 | 4.46247 | 9.37574 |
CDS Structure of MLOC_56801
Members of Gene Cluster
This cluster has a confidence assignment of
non-High Confidence.
The gene has a transcript that is part of a cluster represented by
MLOC_56801.2
Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)
Database | Hit | Frame | E-value | Score | % Identity | Description |
---|
Rice PP6 |
LOC_Os06g51084.8 |
-3 |
8e-173 |
520 |
250/287 (87%) |
13106.m10582 protein 1,4-alpha-glucan-branching enzyme, chloroplast precursor, putative, expressed |
TAIR PP10 |
AT2G36390.1 |
-3 |
7e-117 |
376 |
180/303 (59%) |
| Symbols: SBE2.1, BE3 | starch branching enzyme 2.1 | chr2:15264283-15269940 FORWARD LENGTH=858 |