- Predicted Gene MLOC_56797
MLOC_56797 FPKM values
FPKM by Treatment | FPKM by Replicate |
![](/morexGenes/blast_net_images/MLOC_56797_assembly3_WGSMorex_rbca.fasta_treatments.fpkms.png)
| ![](/morexGenes/blast_net_images/MLOC_56797_assembly3_WGSMorex_rbca.fasta_replicates.fpkms.png)
|
Treatment ID | Treatment Description | Rep 1 FPKM | Rep 2 FPKM | Rep 3 FPKM | Treatment FPKM |
---|
EMB | 4-day embryos dissected from germinating grains | 0.169458 | 0.118615 | 0.162895 | 0.14925 |
LEA | Shoots from the seedlings (10 cm shoot stage) | 0.618675 | 2.15704 | 1.70474 | 1.24465 |
INF1 | Young developing inflorescences (5mm) | 0 | 0 | 0 | 0 |
INF2 | Developing inflorescences (1-1.5 cm) | 0 | 0 | 0 | 0 |
ROO | Roots from the seedlings (10 cm shoot stage) | 1.7063 | 2.22134 | 1.62072 | 2.37611 |
NOD | Developing tillers at six leaf stage, 3rd internode | 0.626744 | 0.538949 | 2.61355 | 2.72315 |
CAR5 | Developing grain, bracts removed (5 DPA) | 0 | 0 | 0.0240982 | 0.0235549 |
CAR15 | Developing grain, bracts removed (15 DPA) | 0 | 0 | 0.026982 | 0.0488426 |
CDS Structure of MLOC_56797
Members of Gene Cluster
This cluster has a confidence assignment of
High Confidence.
The gene has a transcript that is part of a cluster represented by
MLOC_56797.4
Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)
Database | Hit | Frame | E-value | Score | % Identity | Description |
---|
Rice PP6 |
LOC_Os02g49060.1 |
+1 |
0.0 |
605 |
334/459 (73%) |
13102.m05552 protein amino acid transporter, putative, expressed |
TAIR PP10 |
AT5G23810.1 |
+1 |
2e-146 |
437 |
231/428 (54%) |
| Symbols: AAP7 | amino acid permease 7 | chr5:8028461-8030730 FORWARD LENGTH=467 |