MLOC_56797 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains0.1694580.1186150.1628950.14925
LEAShoots from the seedlings (10 cm shoot stage)0.6186752.157041.704741.24465
INF1Young developing inflorescences (5mm)0000
INF2Developing inflorescences (1-1.5 cm)0000
ROORoots from the seedlings (10 cm shoot stage)1.70632.221341.620722.37611
NODDeveloping tillers at six leaf stage, 3rd internode0.6267440.5389492.613552.72315
CAR5Developing grain, bracts removed (5 DPA)000.02409820.0235549
CAR15Developing grain, bracts removed (15 DPA)000.0269820.0488426



CDS Structure of MLOC_56797






Members of Gene Cluster

This cluster has a confidence assignment of High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_56797.4
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
AK363522NoneNoneNoneNone
MLOC_56797.4CUST_18150_PI427708080AvailableAvailablecontig_41127 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os02g49060.1 +1 0.0 605 334/459 (73%) 13102.m05552 protein amino acid transporter, putative, expressed
TAIR PP10 AT5G23810.1 +1 2e-146 437 231/428 (54%) | Symbols: AAP7 | amino acid permease 7 | chr5:8028461-8030730 FORWARD LENGTH=467