- Predicted Gene MLOC_56793
MLOC_56793 FPKM values
| FPKM by Treatment | FPKM by Replicate |

| 
|
| Treatment ID | Treatment Description | Rep 1 FPKM | Rep 2 FPKM | Rep 3 FPKM | Treatment FPKM |
|---|
| EMB | 4-day embryos dissected from germinating grains | 0.647906 | 1.02616 | 0.778437 | 0.786269 |
| LEA | Shoots from the seedlings (10 cm shoot stage) | 0.652126 | 0.253441 | 0.364046 | 0.345921 |
| INF1 | Young developing inflorescences (5mm) | 3.1316 | 2.65952 | 2.50694 | 2.14773 |
| INF2 | Developing inflorescences (1-1.5 cm) | 1.84726 | 2.18525 | 1.83302 | 1.95482 |
| ROO | Roots from the seedlings (10 cm shoot stage) | 0.525413 | 1.14961 | 0.61083 | 1.01826 |
| NOD | Developing tillers at six leaf stage, 3rd internode | 0.644262 | 0.560726 | 0.756283 | 1.6212 |
| CAR5 | Developing grain, bracts removed (5 DPA) | 2.47096 | 2.24264 | 2.56325 | 2.06434 |
| CAR15 | Developing grain, bracts removed (15 DPA) | 0.258748 | 0.306294 | 0.199699 | 0.574134 |
CDS Structure of MLOC_56793
Members of Gene Cluster
This cluster has a confidence assignment of
High Confidence.
The gene has a transcript that is part of a cluster represented by
MLOC_56793.3
Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)
| Database | Hit | Frame | E-value | Score | % Identity | Description |
|---|
| Rice PP6 |
LOC_Os01g29430.2 |
-1 |
0.0 |
884 |
472/643 (73%) |
13101.m03060 protein tetratricopeptide-like helical, putative, expressed |
| TAIR PP10 |
AT5G19020.1 |
-1 |
4e-160 |
495 |
284/643 (44%) |
| Symbols: MEF18 | mitochondrial editing factor 18 | chr5:6352771-6354828 REVERSE LENGTH=685 |