MLOC_56792 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains38.502244.296739.459742.9951
LEAShoots from the seedlings (10 cm shoot stage)0.0335680.18062300.101768
INF1Young developing inflorescences (5mm)0.053860100.02243750.0334397
INF2Developing inflorescences (1-1.5 cm)0.01645450.0305600.03613
ROORoots from the seedlings (10 cm shoot stage)9.9257311.18728.139613.1954
NODDeveloping tillers at six leaf stage, 3rd internode00.002850850.005514610.0193321
CAR5Developing grain, bracts removed (5 DPA)0.03921110.03643660.0208510.0334119
CAR15Developing grain, bracts removed (15 DPA)0.2238690.03997770.191490.355085



CDS Structure of MLOC_56792






Members of Gene Cluster

This cluster has a confidence assignment of High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_56792.1
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
AK371752NoneNoneNoneNone
MLOC_56792.1CUST_3663_PI427708080AvailableAvailablecontig_41156 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os03g53800.5 +2 0.0 1001 519/622 (83%) 13103.m05883 protein periplasmic beta-glucosidase precursor, putative, expressed
TAIR PP10 AT5G20950.2 +2 0.0 872 454/624 (73%) Glycosyl hydrolase family protein | chr5:7107609-7110775 REVERSE LENGTH=624