- Predicted Gene MLOC_56784
MLOC_56784 FPKM values
| FPKM by Treatment | FPKM by Replicate |

| 
|
| Treatment ID | Treatment Description | Rep 1 FPKM | Rep 2 FPKM | Rep 3 FPKM | Treatment FPKM |
|---|
| EMB | 4-day embryos dissected from germinating grains | 63.5372 | 52.4015 | 46.2718 | 60.1669 |
| LEA | Shoots from the seedlings (10 cm shoot stage) | 37.364 | 24.6691 | 31.0882 | 26.8345 |
| INF1 | Young developing inflorescences (5mm) | 87.5034 | 86.0283 | 99.3367 | 87.8982 |
| INF2 | Developing inflorescences (1-1.5 cm) | 82.4663 | 73.1749 | 77.4401 | 100.553 |
| ROO | Roots from the seedlings (10 cm shoot stage) | 69.3969 | 53.1765 | 66.3748 | 75.8218 |
| NOD | Developing tillers at six leaf stage, 3rd internode | 8.75568 | 11.5392 | 46.7305 | 60.9705 |
| CAR5 | Developing grain, bracts removed (5 DPA) | 29.0387 | 37.014 | 25.9255 | 38.4842 |
| CAR15 | Developing grain, bracts removed (15 DPA) | 7.71665 | 6.33512 | 6.45693 | 19.1076 |
CDS Structure of MLOC_56784
Members of Gene Cluster
This cluster has a confidence assignment of
High Confidence.
The gene has a transcript that is part of a cluster represented by
MLOC_56784.2
Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)
| Database | Hit | Frame | E-value | Score | % Identity | Description |
|---|
| Rice PP6 |
LOC_Os02g38190.1 |
-1 |
3e-71 |
224 |
154/196 (79%) |
13102.m04200 protein expressed protein |
| TAIR PP10 |
AT2G31410.1 |
-1 |
6e-38 |
137 |
91/151 (60%) |
unknown protein; Has 1719 Blast hits to 1091 proteins in 184 species: Archae - 5; Bacteria - 24; Metazoa - 559; Fungi - 169; Plants - 192; Viruses - 1; Other Eukaryotes - 769 (source: NCBI BLink). | chr2:13392220-13392819 REVERSE LENGTH=199 |