- Predicted Gene MLOC_56778
MLOC_56778 FPKM values
FPKM by Treatment | FPKM by Replicate |
![](/morexGenes/blast_net_images/MLOC_56778_assembly3_WGSMorex_rbca.fasta_treatments.fpkms.png)
| ![](/morexGenes/blast_net_images/MLOC_56778_assembly3_WGSMorex_rbca.fasta_replicates.fpkms.png)
|
Treatment ID | Treatment Description | Rep 1 FPKM | Rep 2 FPKM | Rep 3 FPKM | Treatment FPKM |
---|
EMB | 4-day embryos dissected from germinating grains | 344.786 | 280.287 | 293.146 | 330.472 |
LEA | Shoots from the seedlings (10 cm shoot stage) | 99.6125 | 94.3866 | 134.628 | 98.5018 |
INF1 | Young developing inflorescences (5mm) | 43.208 | 46.2358 | 47.8259 | 42.0777 |
INF2 | Developing inflorescences (1-1.5 cm) | 52.7604 | 42.6917 | 54.0225 | 58.1629 |
ROO | Roots from the seedlings (10 cm shoot stage) | 552.382 | 310.398 | 333.708 | 446.875 |
NOD | Developing tillers at six leaf stage, 3rd internode | 169.094 | 225.506 | 145.602 | 704.546 |
CAR5 | Developing grain, bracts removed (5 DPA) | 165.217 | 181.722 | 183.767 | 193.081 |
CAR15 | Developing grain, bracts removed (15 DPA) | 88.8983 | 82.8993 | 74.2679 | 212.373 |
CDS Structure of MLOC_56778
Members of Gene Cluster
This cluster has a confidence assignment of
High Confidence.
The gene has a transcript that is part of a cluster represented by
MLOC_56778.1
Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)
Database | Hit | Frame | E-value | Score | % Identity | Description |
---|
Rice PP6 |
LOC_Os04g38870.5 |
+2 |
1e-168 |
486 |
252/263 (96%) |
13104.m03746 protein 14-3-3 protein, putative, expressed |
TAIR PP10 |
AT3G02520.1 |
+2 |
1e-148 |
435 |
216/256 (84%) |
| Symbols: GRF7, GF14 NU | general regulatory factor 7 | chr3:526800-527915 REVERSE LENGTH=265 |