- Predicted Gene MLOC_56768
MLOC_56768 FPKM values
FPKM by Treatment | FPKM by Replicate |
![](/morexGenes/blast_net_images/MLOC_56768_assembly3_WGSMorex_rbca.fasta_treatments.fpkms.png)
| ![](/morexGenes/blast_net_images/MLOC_56768_assembly3_WGSMorex_rbca.fasta_replicates.fpkms.png)
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Treatment ID | Treatment Description | Rep 1 FPKM | Rep 2 FPKM | Rep 3 FPKM | Treatment FPKM |
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EMB | 4-day embryos dissected from germinating grains | 75.7025 | 113.943 | 102.147 | 109.167 |
LEA | Shoots from the seedlings (10 cm shoot stage) | 65.1554 | 44.3739 | 38.4904 | 46.1905 |
INF1 | Young developing inflorescences (5mm) | 187.667 | 192.964 | 180.516 | 168.052 |
INF2 | Developing inflorescences (1-1.5 cm) | 149.837 | 170.403 | 162.49 | 186.748 |
ROO | Roots from the seedlings (10 cm shoot stage) | 48.3069 | 101.13 | 75.8346 | 126.487 |
NOD | Developing tillers at six leaf stage, 3rd internode | 24.8217 | 25.7776 | 28.9128 | 101.127 |
CAR5 | Developing grain, bracts removed (5 DPA) | 126.76 | 122.041 | 124.04 | 129.01 |
CAR15 | Developing grain, bracts removed (15 DPA) | 41.3713 | 39.0006 | 34.7213 | 92.6703 |
CDS Structure of MLOC_56768
Members of Gene Cluster
This cluster has a confidence assignment of
High Confidence.
The gene has a transcript that is part of a cluster represented by
MLOC_56768.1
Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)
Database | Hit | Frame | E-value | Score | % Identity | Description |
---|
Rice PP6 |
LOC_Os10g41960.1 |
-1 |
0.0 |
1270 |
623/721 (86%) |
13110.m03933 protein eukaryotic translation initiation factor 3 subunit B, putative, expressed |
TAIR PP10 |
AT5G27640.1 |
-1 |
0.0 |
1047 |
490/672 (73%) |
| Symbols: TIF3B1, EIF3B, ATEIF3B-1, EIF3B-1, ATTIF3B1 | translation initiation factor 3B1 | chr5:9781207-9784759 REVERSE LENGTH=712 |