- Predicted Gene MLOC_56737
MLOC_56737 FPKM values
FPKM by Treatment | FPKM by Replicate |
![](/morexGenes/blast_net_images/MLOC_56737_assembly3_WGSMorex_rbca.fasta_treatments.fpkms.png)
| ![](/morexGenes/blast_net_images/MLOC_56737_assembly3_WGSMorex_rbca.fasta_replicates.fpkms.png)
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Treatment ID | Treatment Description | Rep 1 FPKM | Rep 2 FPKM | Rep 3 FPKM | Treatment FPKM |
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EMB | 4-day embryos dissected from germinating grains | 5.36682 | 6.64204 | 6.5983 | 6.27924 |
LEA | Shoots from the seedlings (10 cm shoot stage) | 3.27269 | 1.70489 | 1.97324 | 2.05116 |
INF1 | Young developing inflorescences (5mm) | 3.2137 | 3.67296 | 3.13442 | 2.74859 |
INF2 | Developing inflorescences (1-1.5 cm) | 2.75262 | 2.6571 | 2.99437 | 2.93681 |
ROO | Roots from the seedlings (10 cm shoot stage) | 3.79474 | 6.88051 | 4.78259 | 7.54469 |
NOD | Developing tillers at six leaf stage, 3rd internode | 8.56316 | 6.2873 | 6.25004 | 21.3378 |
CAR5 | Developing grain, bracts removed (5 DPA) | 10.1788 | 9.5903 | 12.0485 | 9.95366 |
CAR15 | Developing grain, bracts removed (15 DPA) | 3.70026 | 3.76368 | 2.98278 | 7.7926 |
CDS Structure of MLOC_56737
Members of Gene Cluster
This cluster has a confidence assignment of
High Confidence.
The gene has a transcript that is part of a cluster represented by
MLOC_56737.5
Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)
Database | Hit | Frame | E-value | Score | % Identity | Description |
---|
Rice PP6 |
LOC_Os01g59670.1 |
+3 |
1e-119 |
407 |
285/690 (41%) |
13101.m06345 protein expressed protein |
TAIR PP10 |
AT2G32760.2 |
+3 |
5e-31 |
126 |
89/227 (39%) |
unknown protein; Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). | chr2:13892642-13894295 FORWARD LENGTH=276 |