MLOC_56718 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains8.979112.163810.603111.5992
LEAShoots from the seedlings (10 cm shoot stage)7.726783.476124.630154.53502
INF1Young developing inflorescences (5mm)29.089328.086823.83323.576
INF2Developing inflorescences (1-1.5 cm)23.408227.534620.847728.5678
ROORoots from the seedlings (10 cm shoot stage)2.493476.801565.066347.48552
NODDeveloping tillers at six leaf stage, 3rd internode0.8453131.369351.701765.04428
CAR5Developing grain, bracts removed (5 DPA)9.954210.415510.505210.8058
CAR15Developing grain, bracts removed (15 DPA)1.73671.662091.838264.27981



CDS Structure of MLOC_56718






Members of Gene Cluster

This cluster has a confidence assignment of High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_56718.1
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
AK376341NoneNoneNoneNone
MLOC_56718.1CUST_3652_PI427708080AvailableAvailablecontig_41083 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os10g34820.2 -3 0.0 586 376/590 (64%) 13110.m03110 protein CDT1B - Putative DNA replication initiation protein, expressed
TAIR PP10 AT2G31270.1 -3 1e-40 160 128/453 (28%) | Symbols: ATCDT1A, CDT1A, CDT1 | homolog of yeast CDT1 A | chr2:13329037-13331544 FORWARD LENGTH=571