- Predicted Gene MLOC_56717
MLOC_56717 FPKM values
| FPKM by Treatment | FPKM by Replicate |

| 
|
| Treatment ID | Treatment Description | Rep 1 FPKM | Rep 2 FPKM | Rep 3 FPKM | Treatment FPKM |
|---|
| EMB | 4-day embryos dissected from germinating grains | 0.735308 | 0.579331 | 0.812045 | 0.729786 |
| LEA | Shoots from the seedlings (10 cm shoot stage) | 0.532062 | 0.272414 | 0.52099 | 0.337183 |
| INF1 | Young developing inflorescences (5mm) | 0.684743 | 1.33932 | 1.30269 | 0.953475 |
| INF2 | Developing inflorescences (1-1.5 cm) | 1.19977 | 1.14901 | 1.05934 | 1.37473 |
| ROO | Roots from the seedlings (10 cm shoot stage) | 1.31805 | 0.665139 | 0.750774 | 0.843243 |
| NOD | Developing tillers at six leaf stage, 3rd internode | 0.185523 | 0.64272 | 0.719073 | 1.37789 |
| CAR5 | Developing grain, bracts removed (5 DPA) | 0.477681 | 0.693202 | 0.686114 | 0.650259 |
| CAR15 | Developing grain, bracts removed (15 DPA) | 0.217599 | 0.14264 | 0.143783 | 0.408771 |
CDS Structure of MLOC_56717
Members of Gene Cluster
This cluster has a confidence assignment of
High Confidence.
The gene has a transcript that is part of a cluster represented by
MLOC_56717.1
Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)
| Database | Hit | Frame | E-value | Score | % Identity | Description |
|---|
| Rice PP6 |
LOC_Os10g34810.1 |
+1 |
3e-145 |
445 |
254/359 (71%) |
13110.m03108 protein expressed protein |
| TAIR PP10 |
AT1G73380.1 |
+1 |
2e-46 |
174 |
128/371 (35%) |
unknown protein; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF1308 (InterPro:IPR010733); Has 162 Blast hits to 160 proteins in 67 species: Archae - 0; Bacteria - 2; Metazoa - 120; Fungi - 0; Plants - 34; Viruses - 0; Other Eukaryotes - 6 (source: NCBI BLink). | chr1:27589100-27590657 FORWARD LENGTH=434 |