- Predicted Gene MLOC_56713
MLOC_56713 FPKM values
FPKM by Treatment | FPKM by Replicate |
|
|
Treatment ID | Treatment Description | Rep 1 FPKM | Rep 2 FPKM | Rep 3 FPKM | Treatment FPKM |
---|
EMB | 4-day embryos dissected from germinating grains | 58.9243 | 98.3572 | 86.9099 | 87.5072 |
LEA | Shoots from the seedlings (10 cm shoot stage) | 69.8721 | 50.5542 | 42.8777 | 46.5584 |
INF1 | Young developing inflorescences (5mm) | 94.2045 | 84.6702 | 65.23 | 69.7009 |
INF2 | Developing inflorescences (1-1.5 cm) | 73.3183 | 83.1874 | 71.4132 | 83.7883 |
ROO | Roots from the seedlings (10 cm shoot stage) | 53.1679 | 80.0443 | 54.9351 | 89.4113 |
NOD | Developing tillers at six leaf stage, 3rd internode | 22.747 | 25.6145 | 21.7933 | 80.4638 |
CAR5 | Developing grain, bracts removed (5 DPA) | 124.054 | 102.951 | 91.0302 | 102.761 |
CAR15 | Developing grain, bracts removed (15 DPA) | 16.7515 | 16.0725 | 15.8289 | 37.4911 |
CDS Structure of MLOC_56713
Members of Gene Cluster
This cluster has a confidence assignment of
High Confidence.
The gene has a transcript that is part of a cluster represented by
MLOC_56713.2
Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)
Database | Hit | Frame | E-value | Score | % Identity | Description |
---|
Rice PP6 |
LOC_Os03g17310.1 |
+1 |
0.0 |
1907 |
988/1059 (93%) |
13103.m02070 protein calcium-transporting ATPase, endoplasmic reticulum-type, putative, expressed |
TAIR PP10 |
AT1G07670.1 |
+1 |
0.0 |
1543 |
800/1048 (76%) |
| Symbols: ATECA4, ECA4 | endomembrane-type CA-ATPase 4 | chr1:2370305-2374196 REVERSE LENGTH=1061 |