- Predicted Gene MLOC_56703
MLOC_56703 FPKM values
FPKM by Treatment | FPKM by Replicate |
|
|
Treatment ID | Treatment Description | Rep 1 FPKM | Rep 2 FPKM | Rep 3 FPKM | Treatment FPKM |
---|
EMB | 4-day embryos dissected from germinating grains | 259.234 | 239.375 | 266.402 | 288.461 |
LEA | Shoots from the seedlings (10 cm shoot stage) | 212.503 | 99.3455 | 121.281 | 138.985 |
INF1 | Young developing inflorescences (5mm) | 98.8927 | 95.0226 | 92.5657 | 90.7515 |
INF2 | Developing inflorescences (1-1.5 cm) | 67.9539 | 76.7196 | 80.2778 | 93.2128 |
ROO | Roots from the seedlings (10 cm shoot stage) | 237.604 | 222.349 | 194.017 | 329.082 |
NOD | Developing tillers at six leaf stage, 3rd internode | 412.052 | 338.472 | 198.7 | 1259.77 |
CAR5 | Developing grain, bracts removed (5 DPA) | 140.184 | 131.508 | 128.429 | 150.636 |
CAR15 | Developing grain, bracts removed (15 DPA) | 15.3742 | 15.1277 | 17.9043 | 40.9689 |
CDS Structure of MLOC_56703
Members of Gene Cluster
This cluster has a confidence assignment of
High Confidence.
The gene has a transcript that is part of a cluster represented by
MLOC_56703.1
Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)
Database | Hit | Frame | E-value | Score | % Identity | Description |
---|
Rice PP6 |
LOC_Os11g37890.1 |
-2 |
0.0 |
734 |
353/371 (95%) |
13111.m03714 protein NAD dependent epimerase/dehydratase family protein, putative, expressed |
TAIR PP10 |
AT5G28840.2 |
-2 |
0.0 |
681 |
326/366 (89%) |
| Symbols: GME | GDP-D-mannose 3,5-epimerase | chr5:10862472-10864024 REVERSE LENGTH=377 |