- Predicted Gene MLOC_56684
MLOC_56684 FPKM values
| FPKM by Treatment | FPKM by Replicate |
|---|
| 
|
| Treatment ID | Treatment Description | Rep 1 FPKM | Rep 2 FPKM | Rep 3 FPKM | Treatment FPKM |
|---|
| EMB | 4-day embryos dissected from germinating grains | 13.5278 | 11.9689 | 13.1184 | 12.2568 |
| LEA | Shoots from the seedlings (10 cm shoot stage) | 15.4722 | 7.65337 | 8.98298 | 8.76342 |
| INF1 | Young developing inflorescences (5mm) | 9.77993 | 9.85276 | 10.8649 | 8.31056 |
| INF2 | Developing inflorescences (1-1.5 cm) | 10.3067 | 11.9028 | 11.1097 | 11.8181 |
| ROO | Roots from the seedlings (10 cm shoot stage) | 9.9989 | 10.932 | 10.2297 | 11.8316 |
| NOD | Developing tillers at six leaf stage, 3rd internode | 5.84863 | 6.69552 | 6.67938 | 19.3923 |
| CAR5 | Developing grain, bracts removed (5 DPA) | 11.9017 | 12.4844 | 12.3703 | 11.358 |
| CAR15 | Developing grain, bracts removed (15 DPA) | 1.68659 | 1.52022 | 1.04433 | 3.40663 |
CDS Structure of MLOC_56684
Members of Gene Cluster
This cluster has a confidence assignment of
High Confidence.
The gene has a transcript that is part of a cluster represented by
MLOC_56684.2
Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)
| Database | Hit | Frame | E-value | Score | % Identity | Description |
|---|
| Rice PP6 |
LOC_Os01g04200.1 |
+2 |
0.0 |
754 |
392/531 (74%) |
13101.m00376 protein metallo-beta-lactamase family protein, putative, expressed |
| TAIR PP10 |
AT1G25375.1 |
+2 |
2e-166 |
497 |
255/477 (53%) |
Metallo-hydrolase/oxidoreductase superfamily protein | chr1:8900279-8903220 REVERSE LENGTH=524 |
