MLOC_56681 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains0000
LEAShoots from the seedlings (10 cm shoot stage)0.1188280.4488510.6224210.367167
INF1Young developing inflorescences (5mm)0000
INF2Developing inflorescences (1-1.5 cm)000.05068960.0704725
ROORoots from the seedlings (10 cm shoot stage)00.056206900.186852
NODDeveloping tillers at six leaf stage, 3rd internode0.9891862.853360.006953177.27973
CAR5Developing grain, bracts removed (5 DPA)0000
CAR15Developing grain, bracts removed (15 DPA)0000



CDS Structure of MLOC_56681






Members of Gene Cluster

This cluster has a confidence assignment of High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_56681.1
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
MLOC_56681.1CUST_13567_PI427708080AvailableAvailablecontig_41048 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os06g35700.1 -1 0.0 616 330/501 (66%) 13106.m03686 protein reticuline oxidase-like protein precursor, putative, expressed
TAIR PP10 AT2G34790.1 -1 5e-140 422 226/509 (44%) | Symbols: MEE23, EDA28 | FAD-binding Berberine family protein | chr2:14673998-14677237 REVERSE LENGTH=532