MLOC_5668 FPKM values
| FPKM by Treatment | FPKM by Replicate |
|---|
| 
|
| Treatment ID | Treatment Description | Rep 1 FPKM | Rep 2 FPKM | Rep 3 FPKM | Treatment FPKM |
|---|
| EMB | 4-day embryos dissected from germinating grains | 82.5975 | 89.6249 | 91.7606 | 94.675 |
| LEA | Shoots from the seedlings (10 cm shoot stage) | 98.1334 | 150.612 | 105.817 | 102.094 |
| INF1 | Young developing inflorescences (5mm) | 7.72809 | 7.3842 | 5.13129 | 6.43637 |
| INF2 | Developing inflorescences (1-1.5 cm) | 15.0485 | 16.1991 | 19.6366 | 21.1709 |
| ROO | Roots from the seedlings (10 cm shoot stage) | 94.542 | 106.651 | 103.015 | 130.535 |
| NOD | Developing tillers at six leaf stage, 3rd internode | 130.708 | 212.336 | 169.827 | 606.642 |
| CAR5 | Developing grain, bracts removed (5 DPA) | 52.4599 | 51.5338 | 49.4226 | 58.9684 |
| CAR15 | Developing grain, bracts removed (15 DPA) | 3.79472 | 3.26749 | 3.17225 | 9.32744 |
CDS Structure of MLOC_5668
Members of Gene Cluster
This cluster has a confidence assignment of
High Confidence.
The gene has a transcript that is part of a cluster represented by
MLOC_5668.1
Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)
| Database | Hit | Frame | E-value | Score | % Identity | Description |
|---|
| Rice PP6 |
LOC_Os02g49700.1 |
+2 |
2e-111 |
344 |
239/350 (68%) |
13102.m05634 protein homeobox associated leucine zipper, putative, expressed |
| TAIR PP10 |
AT3G01470.1 |
+2 |
2e-46 |
167 |
101/178 (57%) |
| Symbols: ATHB-1, ATHB1, HD-ZIP-1, HAT5, HB-1 | homeobox 1 | chr3:182648-184034 REVERSE LENGTH=272 |
