- Predicted Gene MLOC_56670
MLOC_56670 FPKM values
| FPKM by Treatment | FPKM by Replicate |

| 
|
| Treatment ID | Treatment Description | Rep 1 FPKM | Rep 2 FPKM | Rep 3 FPKM | Treatment FPKM |
|---|
| EMB | 4-day embryos dissected from germinating grains | 0.487485 | 0.508461 | 0.613975 | 0.543345 |
| LEA | Shoots from the seedlings (10 cm shoot stage) | 0.338595 | 0.728634 | 1.25783 | 0.629393 |
| INF1 | Young developing inflorescences (5mm) | 6.37204 | 3.79903 | 1.81384 | 3.5888 |
| INF2 | Developing inflorescences (1-1.5 cm) | 0.0437095 | 0.0419341 | 0.199573 | 0.100219 |
| ROO | Roots from the seedlings (10 cm shoot stage) | 0.63647 | 0.311791 | 0.14208 | 0.359376 |
| NOD | Developing tillers at six leaf stage, 3rd internode | 4.95975 | 1.12064 | 0.144822 | 1.94203 |
| CAR5 | Developing grain, bracts removed (5 DPA) | 0.352833 | 0.0777405 | 0 | 0.213285 |
| CAR15 | Developing grain, bracts removed (15 DPA) | 0 | 0.0610567 | 0 | 0.245463 |
CDS Structure of MLOC_56670
Members of Gene Cluster
This cluster has a confidence assignment of
High Confidence.
The gene has a transcript that is part of a cluster represented by
MLOC_56670.1
Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)
| Database | Hit | Frame | E-value | Score | % Identity | Description |
|---|
| Rice PP6 |
LOC_Os01g50410.1 |
+2 |
0.0 |
561 |
309/413 (75%) |
13101.m05244 protein STE_MEKK_ste11_MAP3K.6 - STE kinases include homologs to sterile 7, sterile 11 and sterile 20 from yeast, expressed |
| TAIR PP10 |
AT4G26890.1 |
+2 |
3e-69 |
233 |
127/301 (42%) |
| Symbols: MAPKKK16 | mitogen-activated protein kinase kinase kinase 16 | chr4:13512072-13513406 FORWARD LENGTH=444 |