- Predicted Gene MLOC_56646
MLOC_56646 FPKM values
FPKM by Treatment | FPKM by Replicate |
|
|
Treatment ID | Treatment Description | Rep 1 FPKM | Rep 2 FPKM | Rep 3 FPKM | Treatment FPKM |
---|
EMB | 4-day embryos dissected from germinating grains | 0 | 0 | 0 | 0 |
LEA | Shoots from the seedlings (10 cm shoot stage) | 0 | 0 | 0 | 0 |
INF1 | Young developing inflorescences (5mm) | 0 | 0 | 0 | 0 |
INF2 | Developing inflorescences (1-1.5 cm) | 0.0381603 | 0.0360022 | 0 | 0.0484948 |
ROO | Roots from the seedlings (10 cm shoot stage) | 0 | 0.0495912 | 0 | 0.204855 |
NOD | Developing tillers at six leaf stage, 3rd internode | 0.0373232 | 0 | 0.0755748 | 0.0551332 |
CAR5 | Developing grain, bracts removed (5 DPA) | 0.60343 | 0.991482 | 1.23581 | 0.820953 |
CAR15 | Developing grain, bracts removed (15 DPA) | 0.337228 | 0.182593 | 0.124134 | 0.550617 |
CDS Structure of MLOC_56646
Members of Gene Cluster
This cluster has a confidence assignment of
non-High Confidence.
The gene has a transcript that is part of a cluster represented by
MLOC_56646.1
Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)
Database | Hit | Frame | E-value | Score | % Identity | Description |
---|
Rice PP6 |
LOC_Os04g50730.1 |
-1 |
3e-82 |
259 |
147/222 (66%) |
13104.m05153 protein RWD domain containing protein, expressed |
TAIR PP10 |
AT1G32340.1 |
-1 |
1e-54 |
194 |
104/226 (46%) |
| Symbols: NHL8 | NDR1/HIN1-like 8 | chr1:11663462-11666037 REVERSE LENGTH=688 |