MLOC_5664 FPKM values
| FPKM by Treatment | FPKM by Replicate |
|---|
| 
|
| Treatment ID | Treatment Description | Rep 1 FPKM | Rep 2 FPKM | Rep 3 FPKM | Treatment FPKM |
|---|
| EMB | 4-day embryos dissected from germinating grains | 17.4982 | 27.9443 | 25.808 | 21.0199 |
| LEA | Shoots from the seedlings (10 cm shoot stage) | 16.806 | 12.1697 | 11.7536 | 10.7003 |
| INF1 | Young developing inflorescences (5mm) | 84.7213 | 73.6663 | 72.618 | 55.3404 |
| INF2 | Developing inflorescences (1-1.5 cm) | 55.6652 | 57.1599 | 50.1523 | 51.6428 |
| ROO | Roots from the seedlings (10 cm shoot stage) | 9.20643 | 23.6119 | 18.383 | 21.5444 |
| NOD | Developing tillers at six leaf stage, 3rd internode | 0.917825 | 1.04864 | 3.5183 | 4.38924 |
| CAR5 | Developing grain, bracts removed (5 DPA) | 28.1571 | 25.9686 | 27.5704 | 22.1665 |
| CAR15 | Developing grain, bracts removed (15 DPA) | 8.29952 | 8.05337 | 6.9435 | 15.0538 |
CDS Structure of MLOC_5664
Members of Gene Cluster
This cluster has a confidence assignment of
High Confidence.
The gene has a transcript that is part of a cluster represented by
MLOC_5664.2
Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)
| Database | Hit | Frame | E-value | Score | % Identity | Description |
|---|
| Rice PP6 |
LOC_Os06g43690.1 |
-3 |
0.0 |
1443 |
732/842 (87%) |
13106.m04579 protein WD repeat-containing protein, putative, expressed |
| TAIR PP10 |
AT4G04940.1 |
-3 |
0.0 |
1122 |
561/829 (68%) |
transducin family protein / WD-40 repeat family protein | chr4:2511212-2517052 REVERSE LENGTH=910 |
