MLOC_5663 FPKM values
| FPKM by Treatment | FPKM by Replicate |
|---|
| 
|
| Treatment ID | Treatment Description | Rep 1 FPKM | Rep 2 FPKM | Rep 3 FPKM | Treatment FPKM |
|---|
| EMB | 4-day embryos dissected from germinating grains | 11.2446 | 13.1195 | 11.9072 | 12.0711 |
| LEA | Shoots from the seedlings (10 cm shoot stage) | 8.87803 | 4.88837 | 5.55071 | 5.02596 |
| INF1 | Young developing inflorescences (5mm) | 9.71458 | 7.59498 | 6.90355 | 6.98033 |
| INF2 | Developing inflorescences (1-1.5 cm) | 4.94874 | 4.55756 | 4.66126 | 5.21195 |
| ROO | Roots from the seedlings (10 cm shoot stage) | 16.5499 | 15.2296 | 13.3006 | 15.742 |
| NOD | Developing tillers at six leaf stage, 3rd internode | 25.9181 | 18.4862 | 21.0986 | 47.9393 |
| CAR5 | Developing grain, bracts removed (5 DPA) | 14.4308 | 13.9455 | 12.7288 | 13.3321 |
| CAR15 | Developing grain, bracts removed (15 DPA) | 3.09232 | 3.00911 | 2.86006 | 7.35752 |
CDS Structure of MLOC_5663
Members of Gene Cluster
This cluster has a confidence assignment of
High Confidence.
The gene has a transcript that is part of a cluster represented by
MLOC_5663.1
Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)
| Database | Hit | Frame | E-value | Score | % Identity | Description |
|---|
| Rice PP6 |
LOC_Os06g43700.1 |
+1 |
0.0 |
684 |
401/492 (82%) |
13106.m04580 protein transmembrane amino acid transporter protein, putative, expressed |
| TAIR PP10 |
AT1G80510.1 |
+1 |
7e-166 |
494 |
282/417 (68%) |
Transmembrane amino acid transporter family protein | chr1:30273100-30274569 FORWARD LENGTH=489 |
