- Predicted Gene MLOC_56627
MLOC_56627 FPKM values
FPKM by Treatment | FPKM by Replicate |
![](/morexGenes/blast_net_images/MLOC_56627_assembly3_WGSMorex_rbca.fasta_treatments.fpkms.png)
| ![](/morexGenes/blast_net_images/MLOC_56627_assembly3_WGSMorex_rbca.fasta_replicates.fpkms.png)
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Treatment ID | Treatment Description | Rep 1 FPKM | Rep 2 FPKM | Rep 3 FPKM | Treatment FPKM |
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EMB | 4-day embryos dissected from germinating grains | 1.88183 | 3.63904 | 3.13763 | 2.77764 |
LEA | Shoots from the seedlings (10 cm shoot stage) | 2.08986 | 2.10273 | 1.62555 | 1.56629 |
INF1 | Young developing inflorescences (5mm) | 19.5037 | 14.9892 | 18.6962 | 13.5449 |
INF2 | Developing inflorescences (1-1.5 cm) | 58.1922 | 50.5721 | 52.209 | 53.6731 |
ROO | Roots from the seedlings (10 cm shoot stage) | 0.873224 | 1.5021 | 1.6747 | 1.55036 |
NOD | Developing tillers at six leaf stage, 3rd internode | 0.349929 | 1.0355 | 1.14575 | 3.25486 |
CAR5 | Developing grain, bracts removed (5 DPA) | 39.9418 | 30.9488 | 39.27 | 31.7583 |
CAR15 | Developing grain, bracts removed (15 DPA) | 13.7794 | 12.9212 | 11.4621 | 26.1079 |
CDS Structure of MLOC_56627
Members of Gene Cluster
This cluster has a confidence assignment of
High Confidence.
The gene has a transcript that is part of a cluster represented by
MLOC_56627.3
Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)
Database | Hit | Frame | E-value | Score | % Identity | Description |
---|
Rice PP6 |
LOC_Os04g02820.2 |
+3 |
0.0 |
946 |
498/843 (59%) |
13104.m00200 protein elongation factor, putative, expressed |
TAIR PP10 |
AT1G56070.1 |
+3 |
0.0 |
914 |
477/846 (56%) |
| Symbols: LOS1 | Ribosomal protein S5/Elongation factor G/III/V family protein | chr1:20968245-20971077 REVERSE LENGTH=843 |