- Predicted Gene MLOC_56623
MLOC_56623 FPKM values
| FPKM by Treatment | FPKM by Replicate |

| 
|
| Treatment ID | Treatment Description | Rep 1 FPKM | Rep 2 FPKM | Rep 3 FPKM | Treatment FPKM |
|---|
| EMB | 4-day embryos dissected from germinating grains | 50.2945 | 38.7802 | 43.5733 | 48.0775 |
| LEA | Shoots from the seedlings (10 cm shoot stage) | 47.7344 | 27.2274 | 29.4039 | 31.1265 |
| INF1 | Young developing inflorescences (5mm) | 42.1309 | 48.5877 | 47.6381 | 41.7475 |
| INF2 | Developing inflorescences (1-1.5 cm) | 36.2334 | 42.199 | 47.3541 | 50.4994 |
| ROO | Roots from the seedlings (10 cm shoot stage) | 39.4242 | 45.0054 | 46.151 | 61.6811 |
| NOD | Developing tillers at six leaf stage, 3rd internode | 126.578 | 121.89 | 111.102 | 431.583 |
| CAR5 | Developing grain, bracts removed (5 DPA) | 27.9358 | 32.0738 | 29.9992 | 33.6441 |
| CAR15 | Developing grain, bracts removed (15 DPA) | 7.92212 | 7.24146 | 8.83194 | 20.4189 |
CDS Structure of MLOC_56623
Members of Gene Cluster
This cluster has a confidence assignment of
High Confidence.
The gene has a transcript that is part of a cluster represented by
MLOC_56623.1
Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)
| Database | Hit | Frame | E-value | Score | % Identity | Description |
|---|
| Rice PP6 |
LOC_Os07g44350.1 |
-1 |
9e-147 |
424 |
235/268 (88%) |
13107.m04667 protein sec20 domain containing protein, expressed |
| TAIR PP10 |
AT3G17440.1 |
-1 |
2e-118 |
351 |
194/263 (74%) |
| Symbols: NPSN13, ATNPSN13 | novel plant snare 13 | chr3:5969909-5972290 REVERSE LENGTH=269 |