MLOC_56609 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains21.362314.659320.093217.5706
LEAShoots from the seedlings (10 cm shoot stage)10.72583.751394.037685.23007
INF1Young developing inflorescences (5mm)0.1241520.2737370.1026150.162428
INF2Developing inflorescences (1-1.5 cm)0.03920270.037070.1496860.0885932
ROORoots from the seedlings (10 cm shoot stage)22.358311.439816.726115.4043
NODDeveloping tillers at six leaf stage, 3rd internode52.555246.852815.0819117.981
CAR5Developing grain, bracts removed (5 DPA)15.414515.654216.908616.8584
CAR15Developing grain, bracts removed (15 DPA)5.892666.019845.0003914.0485



CDS Structure of MLOC_56609






Members of Gene Cluster

This cluster has a confidence assignment of non-High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_56609.2
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
MLOC_56609.2CUST_12793_PI427708083AvailableAvailablecontig_40987 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os03g54050.1 +1 1e-21 94 51/107 (48%) 13103.m05922 protein anther-specific proline-rich protein APG precursor, putative, expressed
TAIR PP10None-----