MLOC_56604 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains00.08664540.09470030.0656235
LEAShoots from the seedlings (10 cm shoot stage)0.119450.1164930.04400480.0818245
INF1Young developing inflorescences (5mm)0.1793680.05616850.1363810.108507
INF2Developing inflorescences (1-1.5 cm)0.1628230.03349350.195260.147234
ROORoots from the seedlings (10 cm shoot stage)0.05268830.07435460.05000580.096226
NODDeveloping tillers at six leaf stage, 3rd internode0.08379440.09368210.08523930.289687
CAR5Developing grain, bracts removed (5 DPA)0.126380.05140710.09630270.0966385
CAR15Developing grain, bracts removed (15 DPA)5.474585.630243.8743813.7388



CDS Structure of MLOC_56604






Members of Gene Cluster

This cluster has a confidence assignment of High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_56604.1
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
MLOC_56604.1CUST_13554_PI427708080AvailableAvailablecontig_40983 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os03g43360.1 +1 7e-12 71 32/34 (94%) 13103.m04659 protein zinc finger, C3HC4 type domain containing protein, expressed
TAIR PP10None-----