- Predicted Gene MLOC_56555
MLOC_56555 FPKM values
| FPKM by Treatment | FPKM by Replicate |

| 
|
| Treatment ID | Treatment Description | Rep 1 FPKM | Rep 2 FPKM | Rep 3 FPKM | Treatment FPKM |
|---|
| EMB | 4-day embryos dissected from germinating grains | 75.5934 | 73.4933 | 91.4926 | 62.275 |
| LEA | Shoots from the seedlings (10 cm shoot stage) | 12.7251 | 12.7402 | 13.4496 | 9.10823 |
| INF1 | Young developing inflorescences (5mm) | 7.69658 | 10.2964 | 11.1234 | 6.05872 |
| INF2 | Developing inflorescences (1-1.5 cm) | 5.3771 | 4.81032 | 4.83464 | 4.46083 |
| ROO | Roots from the seedlings (10 cm shoot stage) | 12.5727 | 14.5787 | 15.8014 | 13.5346 |
| NOD | Developing tillers at six leaf stage, 3rd internode | 20.2178 | 9.39995 | 8.3624 | 26.1155 |
| CAR5 | Developing grain, bracts removed (5 DPA) | 4.91935 | 5.41935 | 6.80346 | 4.19377 |
| CAR15 | Developing grain, bracts removed (15 DPA) | 1.12345 | 0.875818 | 0.847874 | 1.76748 |
CDS Structure of MLOC_56555
Members of Gene Cluster
This cluster has a confidence assignment of
non-High Confidence.
The gene has a transcript that is part of a cluster represented by
MLOC_56555.1
Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)
| Database | Hit | Frame | E-value | Score | % Identity | Description |
|---|
| Rice PP6 |
LOC_Os01g55780.1 |
+2 |
4e-140 |
419 |
196/225 (87%) |
13101.m05884 protein glycerophosphoryl diester phosphodiesterase family protein, putative, expressed |
| TAIR PP10 |
AT5G08030.1 |
+2 |
4e-109 |
337 |
150/205 (73%) |
PLC-like phosphodiesterases superfamily protein | chr5:2575152-2576770 REVERSE LENGTH=372 |