MLOC_56540 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains0.7065770.4659280.8849970.63717
LEAShoots from the seedlings (10 cm shoot stage)0.90371900.07016820.447843
INF1Young developing inflorescences (5mm)1.420141.556232.001631.36302
INF2Developing inflorescences (1-1.5 cm)1.468661.336861.230031.49488
ROORoots from the seedlings (10 cm shoot stage)0.2619430.09449860.404820.185483
NODDeveloping tillers at six leaf stage, 3rd internode0.4263770.9917720.4757942.85978
CAR5Developing grain, bracts removed (5 DPA)0.2888650.4166480.312140.345396
CAR15Developing grain, bracts removed (15 DPA)0.5061320.4597460.2864041.09647



CDS Structure of MLOC_56540






Members of Gene Cluster

This cluster has a confidence assignment of High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_56540.5
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
MLOC_56540.5CUST_13540_PI427708080AvailableAvailablecontig_40932 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os01g68130.1 +2 4e-39 148 90/120 (75%) 13101.m07412 protein expressed protein
TAIR PP10None-----