- Predicted Gene MLOC_56540
MLOC_56540 FPKM values
| FPKM by Treatment | FPKM by Replicate |

| 
|
| Treatment ID | Treatment Description | Rep 1 FPKM | Rep 2 FPKM | Rep 3 FPKM | Treatment FPKM |
|---|
| EMB | 4-day embryos dissected from germinating grains | 0.706577 | 0.465928 | 0.884997 | 0.63717 |
| LEA | Shoots from the seedlings (10 cm shoot stage) | 0.903719 | 0 | 0.0701682 | 0.447843 |
| INF1 | Young developing inflorescences (5mm) | 1.42014 | 1.55623 | 2.00163 | 1.36302 |
| INF2 | Developing inflorescences (1-1.5 cm) | 1.46866 | 1.33686 | 1.23003 | 1.49488 |
| ROO | Roots from the seedlings (10 cm shoot stage) | 0.261943 | 0.0944986 | 0.40482 | 0.185483 |
| NOD | Developing tillers at six leaf stage, 3rd internode | 0.426377 | 0.991772 | 0.475794 | 2.85978 |
| CAR5 | Developing grain, bracts removed (5 DPA) | 0.288865 | 0.416648 | 0.31214 | 0.345396 |
| CAR15 | Developing grain, bracts removed (15 DPA) | 0.506132 | 0.459746 | 0.286404 | 1.09647 |
CDS Structure of MLOC_56540
Members of Gene Cluster
This cluster has a confidence assignment of
High Confidence.
The gene has a transcript that is part of a cluster represented by
MLOC_56540.5
Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)
| Database | Hit | Frame | E-value | Score | % Identity | Description |
|---|
| Rice PP6 |
LOC_Os01g68130.1 |
+2 |
4e-39 |
148 |
90/120 (75%) |
13101.m07412 protein expressed protein |
| TAIR PP10 | None | - | - | - | - | - |