- Predicted Gene MLOC_56536
MLOC_56536 FPKM values
| FPKM by Treatment | FPKM by Replicate |

| 
|
| Treatment ID | Treatment Description | Rep 1 FPKM | Rep 2 FPKM | Rep 3 FPKM | Treatment FPKM |
|---|
| EMB | 4-day embryos dissected from germinating grains | 196.2 | 107.213 | 120.529 | 129.387 |
| LEA | Shoots from the seedlings (10 cm shoot stage) | 70.7305 | 22.8232 | 38.2623 | 35.1318 |
| INF1 | Young developing inflorescences (5mm) | 190.601 | 197.694 | 198.534 | 171.137 |
| INF2 | Developing inflorescences (1-1.5 cm) | 111.58 | 126.115 | 140.017 | 140.54 |
| ROO | Roots from the seedlings (10 cm shoot stage) | 158.435 | 111.417 | 117.541 | 127.208 |
| NOD | Developing tillers at six leaf stage, 3rd internode | 3.48651 | 3.62355 | 14.0247 | 16.1211 |
| CAR5 | Developing grain, bracts removed (5 DPA) | 130.715 | 132.978 | 135.354 | 133.456 |
| CAR15 | Developing grain, bracts removed (15 DPA) | 55.8057 | 51.9558 | 38.2003 | 124.025 |
CDS Structure of MLOC_56536
Members of Gene Cluster
This cluster has a confidence assignment of
High Confidence.
The gene has a transcript that is part of a cluster represented by
MLOC_56536.2
Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)
| Database | Hit | Frame | E-value | Score | % Identity | Description |
|---|
| Rice PP6 |
LOC_Os01g49290.1 |
+3 |
0.0 |
570 |
283/332 (85%) |
13101.m05124 protein WD repeat-containing protein, putative, expressed |
| TAIR PP10 |
AT1G18080.1 |
+3 |
1e-164 |
473 |
235/336 (70%) |
| Symbols: ATARCA, RACK1A_AT, RACK1A | Transducin/WD40 repeat-like superfamily protein | chr1:6222325-6223901 FORWARD LENGTH=327 |