- Predicted Gene MLOC_56535
MLOC_56535 FPKM values
| FPKM by Treatment | FPKM by Replicate |

| 
|
| Treatment ID | Treatment Description | Rep 1 FPKM | Rep 2 FPKM | Rep 3 FPKM | Treatment FPKM |
|---|
| EMB | 4-day embryos dissected from germinating grains | 16.0678 | 19.1388 | 19.1048 | 16.1876 |
| LEA | Shoots from the seedlings (10 cm shoot stage) | 20.4861 | 11.2491 | 12.6951 | 12.0637 |
| INF1 | Young developing inflorescences (5mm) | 28.3762 | 31.7916 | 31.1677 | 21.7225 |
| INF2 | Developing inflorescences (1-1.5 cm) | 28.2856 | 32.7827 | 31.1631 | 28.917 |
| ROO | Roots from the seedlings (10 cm shoot stage) | 13.3367 | 19.178 | 15.1113 | 19.1125 |
| NOD | Developing tillers at six leaf stage, 3rd internode | 25.887 | 37.1813 | 20.753 | 107.931 |
| CAR5 | Developing grain, bracts removed (5 DPA) | 25.3393 | 25.379 | 25.8789 | 20.8842 |
| CAR15 | Developing grain, bracts removed (15 DPA) | 16.4042 | 13.4825 | 14.0632 | 28.4799 |
CDS Structure of MLOC_56535
Members of Gene Cluster
This cluster has a confidence assignment of
High Confidence.
The gene has a transcript that is part of a cluster represented by
MLOC_56535.1
Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)
| Database | Hit | Frame | E-value | Score | % Identity | Description |
|---|
| Rice PP6 |
LOC_Os04g46892.1 |
-2 |
0.0 |
617 |
345/423 (82%) |
13104.m04737 protein WD domain, G-beta repeat domain containing protein, expressed |
| TAIR PP10 |
AT2G45540.1 |
-2 |
7e-178 |
570 |
309/511 (60%) |
WD-40 repeat family protein / beige-related | chr2:18757881-18772229 REVERSE LENGTH=2946 |