MLOC_56485 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains0.40079300.7803550.423384
LEAShoots from the seedlings (10 cm shoot stage)0000
INF1Young developing inflorescences (5mm)0.24851100.3110850.343759
INF2Developing inflorescences (1-1.5 cm)0.5528160.3824240.2758250.71804
ROORoots from the seedlings (10 cm shoot stage)000.8532090.197724
NODDeveloping tillers at six leaf stage, 3rd internode00.2847590.4511941.14583
CAR5Developing grain, bracts removed (5 DPA)0.5225780.47097500.576036
CAR15Developing grain, bracts removed (15 DPA)0000.115055



CDS Structure of MLOC_56485






Members of Gene Cluster

This cluster has a confidence assignment of non-High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_56485.1
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
MLOC_56485.1CUST_7817_PI427708083AvailableAvailablecontig_408810 (Not mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os01g64970.1 +3 4e-11 60 28/33 (85%) 13101.m07011 protein CAMK_CAMK_like.11 - CAMK includes calcium/calmodulin depedent protein kinases, expressed
TAIR PP10None-----