MLOC_56472 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains0.08566260.1058270.04983750.120485
LEAShoots from the seedlings (10 cm shoot stage)0.1776150.1275240.1280040.140251
INF1Young developing inflorescences (5mm)2.010090.9801991.752591.55815
INF2Developing inflorescences (1-1.5 cm)57.885152.735251.802168.0386
ROORoots from the seedlings (10 cm shoot stage)0.31679100.3044890.169792
NODDeveloping tillers at six leaf stage, 3rd internode0.05056560.04482210.1531650.223227
CAR5Developing grain, bracts removed (5 DPA)534.361564.64488.332618.321
CAR15Developing grain, bracts removed (15 DPA)23.085532.844225.658678.8578



CDS Structure of MLOC_56472






Members of Gene Cluster

This cluster has a confidence assignment of High Confidence.

The gene has a transcript that is part of a cluster represented by AK249904.1
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
AK249904.1CUST_18755_PI427708080NoneNoneNone
MLOC_14955.1NoneAvailableNonecontig_1569503 (Mapped)
MLOC_56472.2NoneAvailableAvailablecontig_40865 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6None-----
TAIR PP10None-----