- Predicted Gene MLOC_56471
MLOC_56471 FPKM values
| FPKM by Treatment | FPKM by Replicate |

| 
|
| Treatment ID | Treatment Description | Rep 1 FPKM | Rep 2 FPKM | Rep 3 FPKM | Treatment FPKM |
|---|
| EMB | 4-day embryos dissected from germinating grains | 2.3312 | 1.75543 | 2.42031 | 2.16488 |
| LEA | Shoots from the seedlings (10 cm shoot stage) | 2.31474 | 5.78023 | 6.44588 | 4.16079 |
| INF1 | Young developing inflorescences (5mm) | 2.26583 | 2.63341 | 2.59704 | 2.20243 |
| INF2 | Developing inflorescences (1-1.5 cm) | 1.66149 | 1.96137 | 1.51407 | 1.97451 |
| ROO | Roots from the seedlings (10 cm shoot stage) | 3.69542 | 4.31522 | 3.90795 | 4.91969 |
| NOD | Developing tillers at six leaf stage, 3rd internode | 3.42102 | 5.42947 | 4.09859 | 16.404 |
| CAR5 | Developing grain, bracts removed (5 DPA) | 1.44078 | 1.83292 | 1.70941 | 1.66769 |
| CAR15 | Developing grain, bracts removed (15 DPA) | 1.53069 | 1.8779 | 1.84216 | 4.1943 |
CDS Structure of MLOC_56471
Members of Gene Cluster
This cluster has a confidence assignment of
High Confidence.
The gene has a transcript that is part of a cluster represented by
MLOC_56471.1
Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)
| Database | Hit | Frame | E-value | Score | % Identity | Description |
|---|
| Rice PP6 |
LOC_Os08g38610.1 |
-3 |
0.0 |
703 |
395/554 (71%) |
13108.m04097 protein pentatricopeptide, putative |
| TAIR PP10 |
AT1G26900.1 |
-3 |
4e-109 |
358 |
193/458 (42%) |
Pentatricopeptide repeat (PPR) superfamily protein | chr1:9319756-9321474 REVERSE LENGTH=572 |