- Predicted Gene MLOC_56470
MLOC_56470 FPKM values
| FPKM by Treatment | FPKM by Replicate |

| 
|
| Treatment ID | Treatment Description | Rep 1 FPKM | Rep 2 FPKM | Rep 3 FPKM | Treatment FPKM |
|---|
| EMB | 4-day embryos dissected from germinating grains | 395.913 | 256.72 | 264.248 | 265.821 |
| LEA | Shoots from the seedlings (10 cm shoot stage) | 122.631 | 50.9509 | 77.9167 | 64.4953 |
| INF1 | Young developing inflorescences (5mm) | 260.928 | 236.07 | 236.433 | 185.364 |
| INF2 | Developing inflorescences (1-1.5 cm) | 125.844 | 113.968 | 141.335 | 123.629 |
| ROO | Roots from the seedlings (10 cm shoot stage) | 402.971 | 215.713 | 343.75 | 260.606 |
| NOD | Developing tillers at six leaf stage, 3rd internode | 10.8801 | 9.2447 | 36.9047 | 35.4461 |
| CAR5 | Developing grain, bracts removed (5 DPA) | 118.645 | 123.326 | 122.649 | 106.889 |
| CAR15 | Developing grain, bracts removed (15 DPA) | 36.7615 | 34.0539 | 32.4132 | 74.7658 |
CDS Structure of MLOC_56470
Members of Gene Cluster
This cluster has a confidence assignment of
High Confidence.
The gene has a transcript that is part of a cluster represented by
MLOC_56470.1
Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)
| Database | Hit | Frame | E-value | Score | % Identity | Description |
|---|
| Rice PP6 |
LOC_Os11g38959.1 |
+2 |
1e-110 |
332 |
164/183 (90%) |
13111.m03833 protein 40S ribosomal protein S9-2, putative, expressed |
| TAIR PP10 |
AT5G39850.1 |
+2 |
1e-107 |
324 |
164/187 (88%) |
Ribosomal protein S4 | chr5:15950053-15951171 FORWARD LENGTH=197 |