MLOC_56451 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains5.492675.592175.160655.75354
LEAShoots from the seedlings (10 cm shoot stage)9.894478.3077219.172710.7021
INF1Young developing inflorescences (5mm)1.780361.34732.006321.52458
INF2Developing inflorescences (1-1.5 cm)1.978432.277412.384062.53966
ROORoots from the seedlings (10 cm shoot stage)36.113826.10338.452335.3855
NODDeveloping tillers at six leaf stage, 3rd internode10.32886.5063214.590224.6989
CAR5Developing grain, bracts removed (5 DPA)2.129732.045891.874252.1117
CAR15Developing grain, bracts removed (15 DPA)0.6330881.002040.7446742.0576



CDS Structure of MLOC_56451






Members of Gene Cluster

This cluster has a confidence assignment of High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_56451.1
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
AK353668NoneNoneNoneNone
MLOC_56451.1CUST_3608_PI427708080AvailableAvailablecontig_40843 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os01g44050.1 +2 2e-166 486 325/376 (86%) 13101.m04563 protein siroheme synthase, putative, expressed
TAIR PP10 AT5G40850.1 +2 1e-134 402 237/325 (73%) | Symbols: UPM1 | urophorphyrin methylase 1 | chr5:16367205-16368724 FORWARD LENGTH=369