- Predicted Gene MLOC_56451
MLOC_56451 FPKM values
FPKM by Treatment | FPKM by Replicate |
![](/morexGenes/blast_net_images/MLOC_56451_assembly3_WGSMorex_rbca.fasta_treatments.fpkms.png)
| ![](/morexGenes/blast_net_images/MLOC_56451_assembly3_WGSMorex_rbca.fasta_replicates.fpkms.png)
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Treatment ID | Treatment Description | Rep 1 FPKM | Rep 2 FPKM | Rep 3 FPKM | Treatment FPKM |
---|
EMB | 4-day embryos dissected from germinating grains | 5.49267 | 5.59217 | 5.16065 | 5.75354 |
LEA | Shoots from the seedlings (10 cm shoot stage) | 9.89447 | 8.30772 | 19.1727 | 10.7021 |
INF1 | Young developing inflorescences (5mm) | 1.78036 | 1.3473 | 2.00632 | 1.52458 |
INF2 | Developing inflorescences (1-1.5 cm) | 1.97843 | 2.27741 | 2.38406 | 2.53966 |
ROO | Roots from the seedlings (10 cm shoot stage) | 36.1138 | 26.103 | 38.4523 | 35.3855 |
NOD | Developing tillers at six leaf stage, 3rd internode | 10.3288 | 6.50632 | 14.5902 | 24.6989 |
CAR5 | Developing grain, bracts removed (5 DPA) | 2.12973 | 2.04589 | 1.87425 | 2.1117 |
CAR15 | Developing grain, bracts removed (15 DPA) | 0.633088 | 1.00204 | 0.744674 | 2.0576 |
CDS Structure of MLOC_56451
Members of Gene Cluster
This cluster has a confidence assignment of
High Confidence.
The gene has a transcript that is part of a cluster represented by
MLOC_56451.1
Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)
Database | Hit | Frame | E-value | Score | % Identity | Description |
---|
Rice PP6 |
LOC_Os01g44050.1 |
+2 |
2e-166 |
486 |
325/376 (86%) |
13101.m04563 protein siroheme synthase, putative, expressed |
TAIR PP10 |
AT5G40850.1 |
+2 |
1e-134 |
402 |
237/325 (73%) |
| Symbols: UPM1 | urophorphyrin methylase 1 | chr5:16367205-16368724 FORWARD LENGTH=369 |