- Predicted Gene MLOC_56440
MLOC_56440 FPKM values
| FPKM by Treatment | FPKM by Replicate |

| 
|
| Treatment ID | Treatment Description | Rep 1 FPKM | Rep 2 FPKM | Rep 3 FPKM | Treatment FPKM |
|---|
| EMB | 4-day embryos dissected from germinating grains | 0.158301 | 0.0960195 | 0.341352 | 0.150793 |
| LEA | Shoots from the seedlings (10 cm shoot stage) | 0 | 0 | 0.0431014 | 0.029001 |
| INF1 | Young developing inflorescences (5mm) | 0 | 0 | 0 | 0 |
| INF2 | Developing inflorescences (1-1.5 cm) | 0 | 0 | 0.0228403 | 0.0155244 |
| ROO | Roots from the seedlings (10 cm shoot stage) | 5.02552 | 3.10194 | 3.27847 | 3.0705 |
| NOD | Developing tillers at six leaf stage, 3rd internode | 0 | 0 | 0 | 0 |
| CAR5 | Developing grain, bracts removed (5 DPA) | 0 | 0 | 0 | 0 |
| CAR15 | Developing grain, bracts removed (15 DPA) | 0 | 0.0208889 | 0 | 0.0551929 |
CDS Structure of MLOC_56440
Members of Gene Cluster
This cluster has a confidence assignment of
High Confidence.
The gene has a transcript that is part of a cluster represented by
MLOC_56440.1
Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)
| Database | Hit | Frame | E-value | Score | % Identity | Description |
|---|
| Rice PP6 |
LOC_Os10g37920.1 |
+1 |
0.0 |
664 |
443/549 (81%) |
13110.m03458 protein MATE efflux family protein, putative, expressed |
| TAIR PP10 |
AT4G23030.1 |
+1 |
9e-138 |
422 |
274/449 (61%) |
MATE efflux family protein | chr4:12072857-12074365 FORWARD LENGTH=502 |