- Predicted Gene MLOC_56431
MLOC_56431 FPKM values
| FPKM by Treatment | FPKM by Replicate |

| 
|
| Treatment ID | Treatment Description | Rep 1 FPKM | Rep 2 FPKM | Rep 3 FPKM | Treatment FPKM |
|---|
| EMB | 4-day embryos dissected from germinating grains | 27.9412 | 38.9848 | 43.0775 | 39.0207 |
| LEA | Shoots from the seedlings (10 cm shoot stage) | 41.7511 | 37.4363 | 33.0529 | 34.1485 |
| INF1 | Young developing inflorescences (5mm) | 27.9263 | 25.1673 | 25.6025 | 22.2867 |
| INF2 | Developing inflorescences (1-1.5 cm) | 26.9602 | 29.1816 | 31.8365 | 32.5653 |
| ROO | Roots from the seedlings (10 cm shoot stage) | 18.7193 | 34.859 | 30.3964 | 42.3194 |
| NOD | Developing tillers at six leaf stage, 3rd internode | 40.1831 | 33.3602 | 33.1233 | 125.182 |
| CAR5 | Developing grain, bracts removed (5 DPA) | 35.3886 | 35.5771 | 36.3453 | 35.8397 |
| CAR15 | Developing grain, bracts removed (15 DPA) | 14.4785 | 14.007 | 14.0348 | 32.8284 |
CDS Structure of MLOC_56431
Members of Gene Cluster
This cluster has a confidence assignment of
High Confidence.
The gene has a transcript that is part of a cluster represented by
MLOC_56431.2
Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)
| Database | Hit | Frame | E-value | Score | % Identity | Description |
|---|
| Rice PP6 |
LOC_Os07g06710.1 |
+1 |
0.0 |
747 |
400/566 (71%) |
13107.m00644 protein tetratricopeptide repeat, putative, expressed |
| TAIR PP10 |
AT5G21990.1 |
+1 |
0.0 |
548 |
302/568 (53%) |
| Symbols: TPR7 | Tetratricopeptide repeat (TPR)-like superfamily protein | chr5:7273395-7276318 FORWARD LENGTH=554 |