- Predicted Gene MLOC_56421
MLOC_56421 FPKM values
FPKM by Treatment | FPKM by Replicate |
![](/morexGenes/blast_net_images/MLOC_56421_assembly3_WGSMorex_rbca.fasta_treatments.fpkms.png)
| ![](/morexGenes/blast_net_images/MLOC_56421_assembly3_WGSMorex_rbca.fasta_replicates.fpkms.png)
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Treatment ID | Treatment Description | Rep 1 FPKM | Rep 2 FPKM | Rep 3 FPKM | Treatment FPKM |
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EMB | 4-day embryos dissected from germinating grains | 41.6952 | 41.6888 | 37.5522 | 47.3801 |
LEA | Shoots from the seedlings (10 cm shoot stage) | 23.9923 | 7.73608 | 11.0136 | 13.2949 |
INF1 | Young developing inflorescences (5mm) | 87.6314 | 68.6285 | 57.07 | 69.0858 |
INF2 | Developing inflorescences (1-1.5 cm) | 49.4375 | 58.507 | 56.953 | 66.1383 |
ROO | Roots from the seedlings (10 cm shoot stage) | 21.7264 | 38.4811 | 37.5868 | 53.3481 |
NOD | Developing tillers at six leaf stage, 3rd internode | 0.519783 | 0.623745 | 0.825609 | 2.33026 |
CAR5 | Developing grain, bracts removed (5 DPA) | 33.7795 | 32.7889 | 32.2283 | 35.9082 |
CAR15 | Developing grain, bracts removed (15 DPA) | 4.09306 | 3.43983 | 3.96315 | 10.1081 |
CDS Structure of MLOC_56421
Members of Gene Cluster
This cluster has a confidence assignment of
High Confidence.
The gene has a transcript that is part of a cluster represented by
MLOC_56421.5
Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)
Database | Hit | Frame | E-value | Score | % Identity | Description |
---|
Rice PP6 |
LOC_Os09g37006.2 |
+3 |
8e-95 |
292 |
181/242 (75%) |
13109.m03662 protein protein of unknown function domain containing protein, expressed |
TAIR PP10 |
AT1G76010.1 |
+3 |
2e-57 |
196 |
138/187 (74%) |
Alba DNA/RNA-binding protein | chr1:28528505-28530488 REVERSE LENGTH=350 |