MLOC_56413 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains0000
LEAShoots from the seedlings (10 cm shoot stage)0.0297955000.0278559
INF1Young developing inflorescences (5mm)0000
INF2Developing inflorescences (1-1.5 cm)0000
ROORoots from the seedlings (10 cm shoot stage)000.05279820.0214995
NODDeveloping tillers at six leaf stage, 3rd internode00.003116670.04439520.0546114
CAR5Developing grain, bracts removed (5 DPA)25.339920.750318.008821.4297
CAR15Developing grain, bracts removed (15 DPA)0.04464320.03358170.04298270.104407



CDS Structure of MLOC_56413






Members of Gene Cluster

This cluster has a confidence assignment of High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_56413.1
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
MLOC_56413.1CUST_13519_PI427708080AvailableAvailablecontig_40805 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os07g48650.1 +1 0.0 829 464/744 (62%) 13107.m05215 protein OsSub54 - Putative Subtilisin homologue, expressed
TAIR PP10 AT2G05920.1 +1 5e-150 462 297/739 (40%) Subtilase family protein | chr2:2269831-2272207 REVERSE LENGTH=754