- Predicted Gene MLOC_56391
MLOC_56391 FPKM values
| FPKM by Treatment | FPKM by Replicate |

| 
|
| Treatment ID | Treatment Description | Rep 1 FPKM | Rep 2 FPKM | Rep 3 FPKM | Treatment FPKM |
|---|
| EMB | 4-day embryos dissected from germinating grains | 0.225963 | 0.272931 | 0.240417 | 0.252949 |
| LEA | Shoots from the seedlings (10 cm shoot stage) | 0.21921 | 0.184983 | 0.220933 | 0.179195 |
| INF1 | Young developing inflorescences (5mm) | 0.625341 | 0.567125 | 0.880952 | 0.557427 |
| INF2 | Developing inflorescences (1-1.5 cm) | 0.78825 | 0.607689 | 0.756209 | 0.747648 |
| ROO | Roots from the seedlings (10 cm shoot stage) | 0.323476 | 0.196464 | 0.248032 | 0.261088 |
| NOD | Developing tillers at six leaf stage, 3rd internode | 0.0866032 | 0.0505376 | 0.057234 | 0.162848 |
| CAR5 | Developing grain, bracts removed (5 DPA) | 0.420002 | 0.508414 | 0.741016 | 0.51182 |
| CAR15 | Developing grain, bracts removed (15 DPA) | 0.197826 | 0.211007 | 0.218144 | 0.468791 |
CDS Structure of MLOC_56391
Members of Gene Cluster
This cluster has a confidence assignment of
High Confidence.
The gene has a transcript that is part of a cluster represented by
MLOC_56391.3
Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)
| Database | Hit | Frame | E-value | Score | % Identity | Description |
|---|
| Rice PP6 |
LOC_Os02g44480.1 |
-2 |
0.0 |
912 |
444/565 (79%) |
13102.m04965 protein pentatricopeptide, putative |
| TAIR PP10 |
AT5G39350.1 |
-2 |
1e-169 |
519 |
287/637 (45%) |
Tetratricopeptide repeat (TPR)-like superfamily protein | chr5:15750929-15752962 FORWARD LENGTH=677 |