- Predicted Gene MLOC_56387
MLOC_56387 FPKM values
| FPKM by Treatment | FPKM by Replicate |

| 
|
| Treatment ID | Treatment Description | Rep 1 FPKM | Rep 2 FPKM | Rep 3 FPKM | Treatment FPKM |
|---|
| EMB | 4-day embryos dissected from germinating grains | 42.1571 | 36.7827 | 35.1441 | 41.5426 |
| LEA | Shoots from the seedlings (10 cm shoot stage) | 23.6951 | 15.7793 | 14.8248 | 17.6923 |
| INF1 | Young developing inflorescences (5mm) | 58.5032 | 55.7367 | 54.6652 | 52.0653 |
| INF2 | Developing inflorescences (1-1.5 cm) | 56.4892 | 54.422 | 50.9995 | 66.1841 |
| ROO | Roots from the seedlings (10 cm shoot stage) | 28.5702 | 30.6675 | 31.6604 | 44.4878 |
| NOD | Developing tillers at six leaf stage, 3rd internode | 11.6882 | 12.2236 | 10.7868 | 50.1548 |
| CAR5 | Developing grain, bracts removed (5 DPA) | 53.264 | 54.9983 | 57.5057 | 61.8106 |
| CAR15 | Developing grain, bracts removed (15 DPA) | 10.1871 | 10.7777 | 10.1557 | 25.7225 |
CDS Structure of MLOC_56387
Members of Gene Cluster
This cluster has a confidence assignment of
High Confidence.
The gene has a transcript that is part of a cluster represented by
MLOC_56387.1
Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)
| Database | Hit | Frame | E-value | Score | % Identity | Description |
|---|
| Rice PP6 |
LOC_Os05g46560.2 |
-1 |
0.0 |
867 |
451/553 (82%) |
13105.m04975 protein RAN GTPase-activating protein 1, putative, expressed |
| TAIR PP10 |
AT5G19320.1 |
-1 |
0.0 |
615 |
336/549 (61%) |
| Symbols: RANGAP2 | RAN GTPase activating protein 2 | chr5:6505310-6506947 REVERSE LENGTH=545 |