MLOC_56386 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains25.449316.25419.425819.8139
LEAShoots from the seedlings (10 cm shoot stage)8.153159.108528.693977.47439
INF1Young developing inflorescences (5mm)9.8951111.623318.740111.2528
INF2Developing inflorescences (1-1.5 cm)0.4492670.7103853.864451.49003
ROORoots from the seedlings (10 cm shoot stage)22.592818.5412.202222.7221
NODDeveloping tillers at six leaf stage, 3rd internode79.595685.9192188.589348.632
CAR5Developing grain, bracts removed (5 DPA)3.308532.283892.257392.60387
CAR15Developing grain, bracts removed (15 DPA)0.2542890.4424360.1862480.757403



CDS Structure of MLOC_56386






Members of Gene Cluster

This cluster has a confidence assignment of High Confidence.

The gene has a transcript that is part of a cluster represented by AK248841.1
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
AK248841.1CUST_23212_PI427708080NoneNoneNone
MLOC_45784.1NoneAvailableNonecontig_281235 (Not mapped)
MLOC_56386.1NoneAvailableAvailablecontig_40780 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6None-----
TAIR PP10None-----