MLOC_5638 FPKM values
| FPKM by Treatment | FPKM by Replicate |
|---|
| 
|
| Treatment ID | Treatment Description | Rep 1 FPKM | Rep 2 FPKM | Rep 3 FPKM | Treatment FPKM |
|---|
| EMB | 4-day embryos dissected from germinating grains | 50.5672 | 50.8527 | 47.5356 | 49.2714 |
| LEA | Shoots from the seedlings (10 cm shoot stage) | 10.6573 | 10.1914 | 28.2625 | 13.8032 |
| INF1 | Young developing inflorescences (5mm) | 8.68026 | 9.81029 | 6.86101 | 7.75362 |
| INF2 | Developing inflorescences (1-1.5 cm) | 3.6469 | 4.41618 | 4.98357 | 4.89327 |
| ROO | Roots from the seedlings (10 cm shoot stage) | 42.7988 | 46.729 | 47.9227 | 52.0046 |
| NOD | Developing tillers at six leaf stage, 3rd internode | 50.4198 | 40.8058 | 27.1324 | 107.591 |
| CAR5 | Developing grain, bracts removed (5 DPA) | 160.849 | 170.985 | 162.58 | 167.097 |
| CAR15 | Developing grain, bracts removed (15 DPA) | 6.78361 | 7.99325 | 6.65885 | 18.3235 |
CDS Structure of MLOC_5638
Members of Gene Cluster
This cluster has a confidence assignment of
High Confidence.
The gene has a transcript that is part of a cluster represented by
MLOC_5638.1
Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)
| Database | Hit | Frame | E-value | Score | % Identity | Description |
|---|
| Rice PP6 |
LOC_Os04g38540.1 |
+2 |
0.0 |
595 |
279/335 (83%) |
13104.m03701 protein aldose 1-epimerase, putative, expressed |
| TAIR PP10 |
AT5G15140.1 |
+2 |
3e-112 |
346 |
169/336 (50%) |
Galactose mutarotase-like superfamily protein | chr5:4908686-4910670 FORWARD LENGTH=490 |
