MLOC_56365 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains1.458413.314252.502892.26734
LEAShoots from the seedlings (10 cm shoot stage)3.65851.566892.68432.22441
INF1Young developing inflorescences (5mm)5.19188.607736.037894.66185
INF2Developing inflorescences (1-1.5 cm)14.40629.2768410.614311.2926
ROORoots from the seedlings (10 cm shoot stage)00.9075735.501581.69829
NODDeveloping tillers at six leaf stage, 3rd internode1.784911.698893.276465.5219
CAR5Developing grain, bracts removed (5 DPA)6.990067.358725.359835.70022
CAR15Developing grain, bracts removed (15 DPA)1.725262.280164.460234.62594



CDS Structure of MLOC_56365






Members of Gene Cluster

This cluster has a confidence assignment of non-High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_56365.1
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
MLOC_56365.1CUST_12792_PI427708083AvailableAvailablecontig_407615 (Not mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os10g19342.1 +2 7e-12 59 29/37 (78%) 13110.m01610 protein IQ calmodulin-binding motif family protein, putative
TAIR PP10None-----