- Predicted Gene MLOC_56349
MLOC_56349 FPKM values
FPKM by Treatment | FPKM by Replicate |
![](/morexGenes/blast_net_images/MLOC_56349_assembly3_WGSMorex_rbca.fasta_treatments.fpkms.png)
| ![](/morexGenes/blast_net_images/MLOC_56349_assembly3_WGSMorex_rbca.fasta_replicates.fpkms.png)
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Treatment ID | Treatment Description | Rep 1 FPKM | Rep 2 FPKM | Rep 3 FPKM | Treatment FPKM |
---|
EMB | 4-day embryos dissected from germinating grains | 17.6591 | 71.3512 | 58.6917 | 54.1362 |
LEA | Shoots from the seedlings (10 cm shoot stage) | 34.8094 | 34.2353 | 29.0155 | 28.9912 |
INF1 | Young developing inflorescences (5mm) | 59.8312 | 58.014 | 49.0396 | 47.0736 |
INF2 | Developing inflorescences (1-1.5 cm) | 60.2219 | 66.2721 | 50.8932 | 64.4151 |
ROO | Roots from the seedlings (10 cm shoot stage) | 17.7993 | 40.662 | 25.8833 | 45.5992 |
NOD | Developing tillers at six leaf stage, 3rd internode | 16.2449 | 16.7484 | 9.34397 | 53.8654 |
CAR5 | Developing grain, bracts removed (5 DPA) | 63.3453 | 57.2325 | 63.0754 | 57.3209 |
CAR15 | Developing grain, bracts removed (15 DPA) | 20.9872 | 19.7379 | 20.9698 | 44.8858 |
CDS Structure of MLOC_56349
Members of Gene Cluster
This cluster has a confidence assignment of
High Confidence.
The gene has a transcript that is part of a cluster represented by
MLOC_56349.1
Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)
Database | Hit | Frame | E-value | Score | % Identity | Description |
---|
Rice PP6 |
LOC_Os02g44520.1 |
+2 |
0.0 |
876 |
441/484 (91%) |
13102.m04971 protein OsSub19 - Putative Subtilisin homologue, expressed |
TAIR PP10 |
AT4G20850.1 |
+2 |
0.0 |
753 |
368/480 (77%) |
| Symbols: TPP2 | tripeptidyl peptidase ii | chr4:11160935-11169889 REVERSE LENGTH=1380 |