MLOC_56346 FPKM values

FPKM by TreatmentFPKM by Replicate
There are no FPKM-by-treatment values calculated for this gene.


Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains0.7427050.2198300
LEAShoots from the seedlings (10 cm shoot stage)0.367246000
INF1Young developing inflorescences (5mm)0.7762771.674140.2433640
INF2Developing inflorescences (1-1.5 cm)1.067770.9910710.4383190
ROORoots from the seedlings (10 cm shoot stage)0.443343000
NODDeveloping tillers at six leaf stage, 3rd internode0.1712070.19521700
CAR5Developing grain, bracts removed (5 DPA)0.2126071.159870.8788470
CAR15Developing grain, bracts removed (15 DPA)0.19460.6360310.8570640



CDS Structure of MLOC_56346






Members of Gene Cluster

This cluster has a confidence assignment of High Confidence.

The gene has a transcript that is part of a cluster represented by AK363651
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
AK363651CUST_20754_PI427708080NoneNoneNone
MLOC_12495.1NoneAvailableAvailablecontig_1563409 (Mapped)
MLOC_26000.1NoneAvailableNonecontig_1727738 (Not mapped)
MLOC_31450.1NoneAvailableNonecontig_2190133 (Not mapped)
MLOC_36128.1NoneAvailableNonecontig_2536597 (Not mapped)
MLOC_36201.1NoneAvailableNonecontig_2539344 (Not mapped)
MLOC_3715.1NoneAvailableNonecontig_1328657 (Not mapped)
MLOC_56346.1NoneAvailableNonecontig_407438 (Not mapped)
MLOC_72288.1NoneAvailableNonecontig_613742 (Not mapped)
MLOC_75645.1NoneAvailableNonecontig_684900 (Not mapped)
MLOC_80869.1NoneAvailableNonecontig_932854 (Not mapped)
MLOC_81763.1NoneAvailableNonecontig_980815 (Not mapped)
MLOC_926.1NoneAvailableNonecontig_1077014 (Not mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6None-----
TAIR PP10None-----